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Model proteins used in the present study. |
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| Organism |
Topta |
Proteinb |
ID |
Length |
Formulac |
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|
|
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| Methanothermus sociabilis |
88 [62] |
CSG_METSC |
P27374 |
571 |
C2812H4405N747O872S16 |
-21875 |
| Methanocaldococcus jannaschii |
85 [43] |
CSG_METJA |
Q58232 |
530 |
C2555H4032N640O865S14 |
-24236 |
| Methanothermus fervidus |
83 [63] |
CSG_METFE |
P27373 |
571 |
C2815H4411N747O872S14 |
-21796 |
| Haloarcula japonica |
42 [64] |
CSG_HALJP |
Q9C4B4 |
828 |
C3669H5647N971O1488 |
-43458 |
| Methanococcus voltae |
38 [42] |
CSG_METVO |
Q50833 |
553 |
C2575H4097N645O884S11 |
-24881 |
| Methanococcoides burtonii |
23 [65] |
CSG_METBU |
Q12YZ7 |
278 |
C1362H2111N355O442S4 |
-11677 |
| Acetogenium kivui |
66 [66] |
SLAP_ACEKI |
P22258 |
736 |
C3584H5648N926O1138S |
-29331 |
| Bacillus stearothermophilus |
65 [67] |
SLAP_BACST |
P35825 |
1198 |
C5676H9113N1489O1863S3 |
-48792 |
| Bacillus licheniformis |
50 [68] |
SLAP_BACLI |
P49052 |
844 |
C3977H6396N1068O1286S2 |
-33598 |
| Aeromonas salmonicida |
23 [69] |
SLAP_AERSA |
P35823 |
481 |
C2250H3580N618O716S2 |
-18233 |
|
a. Topt stands for laboratory optimal growth temperatures in °C, which were taken from the indicated sources. b. Compositions of cell-surface glycoproteins (CSG) from archaea and surface-layer proteins (SLAP) from bacteria were taken from the Swiss-Prot/UniProt database [37] using the noted accession numbers (IDs). Signal sequences were excluded where annotated, and names of the proteins except CSG_METBU correspond to those used in the Swiss-Prot database. c. Chemical formulas and standard molal Gibbs energies of formation from the elements at 25°C and 1 bar ( | ||||||
Dick Geochemical Transactions 2008 9:10 doi:10.1186/1467-4866-9-10 |
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