Table 1

Model proteins used in the present study.

Organism
Topta
Proteinb
ID
Length
Formulac
Math

Methanothermus sociabilis
88 [62]
CSG_METSC
P27374
571
C2812H4405N747O872S16
-21875
Methanocaldococcus jannaschii
85 [43]
CSG_METJA
Q58232
530
C2555H4032N640O865S14
-24236
Methanothermus fervidus
83 [63]
CSG_METFE
P27373
571
C2815H4411N747O872S14
-21796
Haloarcula japonica
42 [64]
CSG_HALJP
Q9C4B4
828
C3669H5647N971O1488
-43458
Methanococcus voltae
38 [42]
CSG_METVO
Q50833
553
C2575H4097N645O884S11
-24881
Methanococcoides burtonii
23 [65]
CSG_METBU
Q12YZ7
278
C1362H2111N355O442S4
-11677
Acetogenium kivui
66 [66]
SLAP_ACEKI
P22258
736
C3584H5648N926O1138S
-29331
Bacillus stearothermophilus
65 [67]
SLAP_BACST
P35825
1198
C5676H9113N1489O1863S3
-48792
Bacillus licheniformis
50 [68]
SLAP_BACLI
P49052
844
C3977H6396N1068O1286S2
-33598
Aeromonas salmonicida
23 [69]
SLAP_AERSA
P35823
481
C2250H3580N618O716S2
-18233

a. Topt stands for laboratory optimal growth temperatures in °C, which were taken from the indicated sources. b. Compositions of cell-surface glycoproteins (CSG) from archaea and surface-layer proteins (SLAP) from bacteria were taken from the Swiss-Prot/UniProt database [37] using the noted accession numbers (IDs). Signal sequences were excluded where annotated, and names of the proteins except CSG_METBU correspond to those used in the Swiss-Prot database. c. Chemical formulas and standard molal Gibbs energies of formation from the elements at 25°C and 1 bar (Math, in kcal mol-1) were calculated for nonionized aqueous proteins.

Dick Geochemical Transactions 2008 9:10   doi:10.1186/1467-4866-9-10